Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEEKNYSWKKNTVLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEE-IYEGDVKGLITNLVQNDLISPDELEDLQQFWKRMKSPNE
2G9W Chain:A ((3-124))
-KLTRLGDLERAVMDHLWSRTEPQTVRQVHEALSARRD-LAYTTVMAVLQRLAKKNLVLQIR---AHRYAPVHGRDELVAGLMVDALAQAEDSGSRQAALVHFVE--RVGADEADALRRALAELEA---
General information:
TITO was launched using:
RESULT:
Template:
2G9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61144 for 716 contacts (-85.4/contact) +
2D Compatibility (PS) -12117 + (NN) -809 + (LL) 28
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -79892.0 ( -111.58 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2G9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G9W-query.scw
PDB file :
Tito_Scwrl_2G9W.pdb
: