Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQE--EQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITY-LYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLS--LPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 3OYM Chain:A ((53-272)) | -----------------------------------PQSDRQKIVLQAHN-LAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASG---------PILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKA-PSTSATVKSL-NVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKHSDIKRLLTKLLV---GRPTKWYDLLPVVQLALNN-TYSPVLK-YTPHQLL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30829 for 1491 contacts (-20.7/contact) +
2D Compatibility (PS) -22527 + (NN) -6472 + (LL) 4676
1D Compatibility (HY) -800 + (ID) 1800
Total energy: -57752.0 ( -38.73 by residue)
QMean score : 0.272
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