Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIENPDH-RARTQEVLTWVAETFPDLKPEIKWNTPMFTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
2OC6 Chain:A ((2-124))
MDVFSEYLAGIADP-FHRERTEEVLTWIKNKYPNLHTEIKWNQPMFTDHGTFIIGFSVSKKHLAVAPEKVTIAHVEDDIVKAGYDYTEQLIRIPWNGPVDYTLLEKMIEFNILDKADCSTFWRK
General information:
TITO was launched using:
RESULT:
Template:
2OC6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67845 for 864 contacts (-78.5/contact) +
2D Compatibility (PS) -13197 + (NN) -4101 + (LL) -76
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -104619.0 ( -121.09 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_2OC6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OC6-query.scw
PDB file :
Tito_Scwrl_2OC6.pdb
: