Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSD---------VSALLLGVCGR-TLFELLRQAFLIP-----KKLT----VDNPFFLTDKEGNF---------------IAKKDDISNREQ-----------------EKFQEIYQSD---------------LHHSETTIFLVDDDDIVHSYEPD----------------------FSISTKRINKKRGILVLYSLPDTLKSGMTESE-----VYAFIWKTFLHIQEIIPSSRIFY-----GQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK-------- |
| 5A7V Chain:A ((24-388)) | ASGQPSNDKKNVLPDWAFGGFERPQGANPVI-----SPIENTKFYCPMTQDYVAWESNDTFNPAATLHDGKIVVLYRAEDKSGVGIGHRTSRLGYATSSDGIHFKREKTPVFYPDNDTQKKLEWPGGCEDPRIAVTAEGLYVMTYTQWNRHIPRLAIATSRNLKDWTKHGPAFAKAYDGKFFNLGCKSGSILTEVVNGKQVIKKIDGKYFMYWGEEHVFAATSEDLVN-WTPYVNTDGSLRKLFSPRDGHFDSQLTECGPPAIYTPKGIVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTRFITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIYNPKKPAAADPLPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27707 for 1794 contacts (15.4/contact) +
2D Compatibility (PS) -25297 + (NN) 6304 + (LL) 720
1D Compatibility (HY) 14800 + (ID) 500
Total energy: 23734.0 ( 13.23 by residue)
QMean score : 0.024
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