Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGSSYLVNPLWDLSRLDHSIGV----MLFIRKFGGSLEE-----------QIAGLLHDVSHTAFSHVVD---YALDFEEEDY-HEQ----IFEDFVKTSTIPAILEKYGYSFEGIFNDISKWKILEQEAPELCADRIDYTLQDLYRHGKISLAEVKEFLQALVMVDGRLYLANIALAEWFVAQYYSEVIDYFYDPLNVYSYEILAEAMRIAFQQETITTADLRLTDAELLAKLNANSDAREKIQLLASPHLEENEVDFTYHHKKKMRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ |
4BZC Chain:C ((42-188)) | --INDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55668 for 726 contacts (-76.7/contact) +
2D Compatibility (PS) -12050 + (NN) -1622 + (LL) 17724
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -66266.0 ( -91.28 by residue)
QMean score : 0.338
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