Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSN-APIDVSAGPVVLSVPD-TSGRYYVLQF-V-DAWSNNFAYVGKRATGTSAGKFL-LTPPNWNGDVPADMIEIKFPTNIGIII-GRL-ACDGEADLPTVRELQ-EQLKITPLNEGKEVDGFPEYDRSLGK-ELAFFEQLRVYMAQFPP-AERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAG-LANIKKATT-NFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTL-ELNPIPPVDSFWSITMYDLPEYFL-CENPINRYSIGDRT-PGIQYNDDGGITIV-VSKDEPTDPKERANWLPAPDAEFRPMF-RLYNPQQPLVDGSYH-FPGFEKK |
| 3U07 Chain:A ((25-435)) | -----TNVDLAEDAYIYGYSIDEAYKFFYHTAVEN------------------NYPLNEFQPTINNDTLHLMGWLDVAAEPVIVSVPDMDEGRYWILHTMDMGHYTN--AAFSSRTRGTK-GGQFMFAAQDWQGEVPASVDEVVRVDSNLVKLMGRIMAVNDEDAK--VALNYMDQWNIRTLSEYLGKNGPKPVQRTYPDPKKSTWLERVNFVLCDGSMGNADKQWLDKYQSIGVEPC----KTDFTPEQLKLAKVGEKKGMEHLVELAPKMTDARTLL-GTRDTLGDAP----------------------RDIFAEGTYLGQWGLPPIEASYRKSDFDSIGQKLDGSKHDYVMRFKA-PNVSEFWSVTIYG-NDNRLMAKNDLNRHSRGDRTMK---ADKDGYYTIYMSANEKGRADDP--NFLPVPEKPFY-AIMRFYGADDAIQSGEYQMPEIKVVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 58152 for 2699 contacts (21.5/contact) +
2D Compatibility (PS) -37863 + (NN) -5638 + (LL) 3832
1D Compatibility (HY) 16000 + (ID) 1250
Total energy: 33233.0 ( 12.31 by residue)
QMean score : 0.102
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