Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDA--VRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVG----GLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN |
| 3AYV Chain:A ((1-241)) | --------------------------------------------------------------------------------------------MDVRLAFPLSRAEEALPRLQALGLGAEVYLDPALLEEDALFQSLRRRFSG---KLSVHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRAAELGADRAVFHS----------GIPHGRTPEEALERALPLAEAL-GLVVRRARTLGVRLLLENSHEPHPEA--LRPVLEAH-AGELGFCFDAAHARVFSRT--------------PDPGPWLALAPEHLHLNDT--DGVYDRHWNLGRGVLGHGAWLRPYLDRTMVLEVREDPEASLAFLQALAGE------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64403 for 1928 contacts (-33.4/contact) +
2D Compatibility (PS) -23931 + (NN) 4466 + (LL) 15104
1D Compatibility (HY) 800 + (ID) 1200
Total energy: -69164.0 ( -35.87 by residue)
QMean score : 0.172
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