Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVA-DFKVKKFVSS-TNSGELKVTNLEANTAQMAT-SSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVN-GGSGDVNVAGVKAKKLKIAI-DSGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 3PET Chain:A ((9-184)) | -------------------------------------KKLITRDYKV--KEFNKIDAGT--VGNIYYTQSTDGKTDLQIYGP--DNIVAL----IQVAVKDNTLFLSIDKSK-KVR------NFKKMKITITSPT---LNGISFK-GVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEGTAQ------------------IAALHSKGVGNIEAGNLRANAVEASSQGVGDITCN----------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10820 for 1354 contacts (-8.0/contact) +
2D Compatibility (PS) -17820 + (NN) 270 + (LL) 9468
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -30002.0 ( -22.16 by residue)
QMean score : 0.441
|
|
|