Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETT------------------------RFGTYAEYTAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTLAIQLAKHAGAEVITTASAKNH-ELLKSLGADQVIDY------KEVNFKDVLSDIDVVFDTMGGQIETDSYDVLKEGTGRLVSIVGISNEDRAKEKNVTATGIWLQPNGEQLKELGKLLANKT-------------IKPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK |
2EIH Chain:B ((1-340)) | MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP--LPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANG-GR-IAIAGASS---GYEGTLPFAHVFYR----QLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPL--EAAAEGHRLLEERRVFGKVVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122266 for 2626 contacts (-46.6/contact) +
2D Compatibility (PS) -31716 + (NN) -5853 + (LL) 492
1D Compatibility (HY) -18000 + (ID) 5550
Total energy: -182893.0 ( -69.65 by residue)
QMean score : 0.500
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