Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MHPIEQLLANNNTTATDIES-NTRLKEGSLQKIIDKDIRT--------SDISLRVLSQIAIFL-NTGADIIAKQLSDIEVANDLAFLIED--
1MN8 Chain:A ((3-97))
QTVTTPLSLTLGHWKDVERIAHNQSVDVKKRRWVTFCSAEWPTFNVGWPRDGTFNRDLITQVKIKVFSPGPHGHPDQVPYIVTWEALAFDPPPWV
General information:
TITO was launched using:
RESULT:
Template:
1MN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13310 for 516 contacts (-25.8/contact) +
2D Compatibility (PS) -8432 + (NN) -1025 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -26167.0 ( -50.71 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_1MN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MN8-query.scw
PDB file :
Tito_Scwrl_1MN8.pdb
: