Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHENLRELEDQLIELRQTYQEVISETREFEDPQ--L----------QNGPINAAEVRLSALRHEIAEVEKKIKKAESKTE
3TNU Chain:B ((382-448))
--------TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMAR------
General information:
TITO was launched using:
RESULT:
Template:
3TNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4460 for 202 contacts (22.1/contact) +
2D Compatibility (PS) -6099 + (NN) -2355 + (LL) 1240
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -5504.0 ( -27.25 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3TNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TNU-query.scw
PDB file :
Tito_Scwrl_3TNU.pdb
: