Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFAKGAGM--FEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKLRDSIK
2O4T Chain:A ((3-92))
-----------------HVSRVEKLPKDYQIVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIGDS--KTYADLYQESIQQHVD
General information:
TITO was launched using:
RESULT:
Template:
2O4T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48765 for 522 contacts (-93.4/contact) +
2D Compatibility (PS) -9691 + (NN) -6622 + (LL) 1364
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -72514.0 ( -138.92 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_2O4T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O4T-query.scw
PDB file :
Tito_Scwrl_2O4T.pdb
: