Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLV-NQMDAPTLFNGCEVTSLAMLLQFNGK--RVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVIITGFDKN-----NFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
1CV8 Chain:A ((8-155)) | -------------------------------------------------KLENFKIRETQGN----NGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQG---------QQFQ------FT--GLTPREMIYFGQTQGRSPQLLN-RMTTYNEVDNLTKNNKGIAILGSRV---------ESR-----NGMHAGHAMAVVGNAKLNNGQEVIIIWNPWDNGFMTQDAKNN----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52695 for 1000 contacts (-52.7/contact) +
2D Compatibility (PS) -14872 + (NN) -3474 + (LL) 5812
1D Compatibility (HY) -800 + (ID) 650
Total energy: -66679.0 ( -66.68 by residue)
QMean score : 0.459
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