Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPEKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIFFIVEGYAAVEL-EDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSESLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGM-IAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKK-SPYRIDKDSLDI
2OZ6 Chain:A ((9-205))
-----------------LLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDD--GREMIIGYLNSGDFFGELGLFE--QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTH-PDGMQIK--ITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFG------
General information:
TITO was launched using:
RESULT:
Template:
2OZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126853 for 1376 contacts (-92.2/contact) +
2D Compatibility (PS) -20041 + (NN) 92 + (LL) 1584
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -154068.0 ( -111.97 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2OZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OZ6-query.scw
PDB file :
Tito_Scwrl_2OZ6.pdb
: