Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFDDSKPIYKQIVHYIHTEIVTGTYEAGDKLLSVRELATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYLTEDKRRIEQL-ENDIAKQLTENFISEMSKLGINKEKIIAWVKKVEEVEVNVSGK
3BY6 Chain:C ((4-111))
MAITQKRPVYLQLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFITGNTASVKNSNQNRLLADLSQ-VIAELIKSGVKGERI-----------------
General information:
TITO was launched using:
RESULT:
Template:
3BY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44987 for 660 contacts (-68.2/contact) +
2D Compatibility (PS) -11330 + (NN) -1492 + (LL) 1608
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -66051.0 ( -100.08 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3BY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BY6-query.scw
PDB file :
Tito_Scwrl_3BY6.pdb
: