Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYRFLKFNINAGSVTLLVMFSSFFILSVILSTLLSMTWEFYAILSALVIVCFFNFKKFFPGEVAVSEEAFYYKSKAYPYSKYIIEC---DAKLIRFKSPSARAIPYYRIVIINKDTRAEKLIKVHNAARRYKGANTQMQVEMEELRDQLKQYQS |
2BA2 Chain:A ((5-85)) | ---------------------------------------------------------------------------GTRYVTHKQLDEKLKNFVTKTEFKEFQTVVMESFAVQNQNIDAQGEQIKELQVEQKAQGKTLQLILEALQGINKRLDNLES |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8967 for 298 contacts (30.1/contact) +
2D Compatibility (PS) -8479 + (NN) -2167 + (LL) 7564
1D Compatibility (HY) 0 + (ID) 500
Total energy: 5385.0 ( 18.07 by residue)
QMean score : 0.195
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