Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYFIDNNNEKDPRINLAVEEFILTELNLDEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDGESFHNFAKFTQPIVEALKRLGVNAELKGRNDLLIDGF----KVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMD---QEMTTEEFRDLLLLY--------IFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVL---AEALVDIDVKEYFGNITKDEFLDLLY
4TVW Chain:B ((16-324))----------DPWFNLAVAECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMA---GKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFA-----------RQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------


General information:
TITO was launched using:
RESULT:

Template: 4TVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92087 for 2214 contacts (-41.6/contact) +
2D Compatibility (PS) -31058 + (NN) -10721 + (LL) 2344
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -156872.0 ( -70.85 by residue)
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_4TVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TVW-query.scw
PDB file : Tito_Scwrl_4TVW.pdb: