Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK
3AA1 Chain:C ((2-22))
-----------------------------------------------------------------------------------YLAHPTRDRAKIQHSRRPPTR
General information:
TITO was launched using:
RESULT:
Template:
3AA1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3601 for 53 contacts (67.9/contact) +
2D Compatibility (PS) -2302 + (NN) -2238 + (LL) 9936
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 10097.0 ( 190.51 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3AA1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AA1-query.scw
PDB file :
Tito_Scwrl_3AA1.pdb
: