Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
4H2X Chain:D ((48-89))
---------------------------LYAAGL-SSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAI--------
General information:
TITO was launched using:
RESULT:
Template:
4H2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13895 for 208 contacts (-66.8/contact) +
2D Compatibility (PS) -4420 + (NN) -3194 + (LL) 3988
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -23571.0 ( -113.32 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4H2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H2X-query.scw
PDB file :
Tito_Scwrl_4H2X.pdb
: