Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRIIGHPNNKVAGIEMNTGSLGHGLSVSVGMALAAK-MDGKSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEADGNNPDKLQAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
3OOY Chain:B ((8-254)) | LQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAKH--QPTAIIAKTFKGRGITGVEDKESWH-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78602 for 2180 contacts (-36.1/contact) +
2D Compatibility (PS) -26308 + (NN) -9823 + (LL) 2204
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -130129.0 ( -59.69 by residue)
QMean score : 0.476
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