Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWFEFATEILKDKDVTVN--PCTSDEFPQKAERPKTSIMSLEKVEKLGF-NIPTWQDALVRFKK |
3SC6 Chain:E ((8-280)) | --VIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS-LYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEF---AARPKYSIFQHNMLRLNGFLQMPSWEEGLERF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120527 for 2341 contacts (-51.5/contact) +
2D Compatibility (PS) -28409 + (NN) -9061 + (LL) 388
1D Compatibility (HY) -26000 + (ID) 5700
Total energy: -189309.0 ( -80.87 by residue)
QMean score : 0.556
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