Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDMPFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDELGFDGPFLEYLRNFKFKG-NILAAKEGEFVFKTEPILQVEASLAEAQLIETALLNIVNFQTLIA-----TK-AAR---------IRS---VI--DDETFAEFGTRRAQEM---DAAIWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYR--------DELEAFRSYAKTHFD-S-IFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKARQMLDEAGFT--EAKIFASSDLDEHTILSLKA--QKAKIDSWGVGTKLITAYDQ-PALGAVYKMAAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENVDKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWDEYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF |
| 1YIR Chain:A ((8-392)) | --FSERIVQNLLDTDFYKLTMMQAVLHNYP-NAEVEWEFRCRNQED--LRLYLPAIREQLEYLAGLAISDEQLAFLERIPFLAPDFIRFLGLFRFNPRYVQTGIE-----NDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLIDSQSAALDCWVREYRGLLGIALTDCITTDAF-LRDFDLYFA-----KLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSACNG-----HPVAKISDTP-------PDFIHY--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104905 for 2720 contacts (-38.6/contact) +
2D Compatibility (PS) -36314 + (NN) -13801 + (LL) 10884
1D Compatibility (HY) -18000 + (ID) 3900
Total energy: -166036.0 ( -61.04 by residue)
QMean score : 0.374
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