Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL
4P7V Chain:E ((6-91))
--EALGMVETKGLTAAIEAADAMVDSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILP---
General information:
TITO was launched using:
RESULT:
Template:
4P7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42238 for 675 contacts (-62.6/contact) +
2D Compatibility (PS) -9538 + (NN) -4160 + (LL) 196
1D Compatibility (HY) -10400 + (ID) 3550
Total energy: -69690.0 ( -103.24 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4P7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P7V-query.scw
PDB file :
Tito_Scwrl_4P7V.pdb
: