Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIP-----EMHIDTDEANAADIAGTNFAKIIKS |
1CZ4 Chain:A ((23-87)) | --------------------------------------------------------------------------------------------------------------------------------------------RVRLDESSRRLLDAEIGDVVEIEKV---R-----KTVGRVYRARPEDENKGIVRIDSVMRNNCGASIGDKVKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38422 for 379 contacts (-101.4/contact) +
2D Compatibility (PS) -6230 + (NN) 561 + (LL) 11288
1D Compatibility (HY) 400 + (ID) 650
Total energy: -33053.0 ( -87.21 by residue)
QMean score : 0.427
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