Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCDDVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLAVAVDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYALDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY
4U6I Chain:B ((1-217))
MKNDLIRPNVLSVKIISNVSPEMAKKLELEPHHKSLGLITADCDDVTYTALDEATKAAEVDVVYARSMYAGAGNASTKLAGEVIGILAGPSPAEVRSGLNATLDFIDSGVGFVSANEDDSICYYAQCVSRTGSYLSKTAGIREGEALAYLVAPPLEAMYALDAALKAADVEMCEFFAPPTETNFAGALLTGSQSACKAACDAFAEAVQSVASNPLGF
General information:
TITO was launched using:
RESULT:
Template:
4U6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125110 for 1853 contacts (-67.5/contact) +
2D Compatibility (PS) -23670 + (NN) -13603 + (LL) 0
1D Compatibility (HY) -25600 + (ID) 7950
Total energy: -195933.0 ( -105.74 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_4U6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U6I-query.scw
PDB file :
Tito_Scwrl_4U6I.pdb
: