Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4AXJ Chain:B ((7-90))
----ALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPRPHFEVDAIL-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4AXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57946 for 662 contacts (-87.5/contact) +
2D Compatibility (PS) -8894 + (NN) -955 + (LL) 6304
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -70491.0 ( -106.48 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4AXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXJ-query.scw
PDB file :
Tito_Scwrl_4AXJ.pdb
: