Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTL--GAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
3KE5 Chain:B ((21-199))
MKLYTKTGDKGTTSVIGG-RVDKDDIRVEAYGTIDEANSHIGYAMTKLQGGAFIDIYNELENIQHELFDCGGDLAIVEQKIPYKVTIVMVESLERKIDLYIEEAPPLERFILPGGSEAAATIHIARTVVRRAERSIVSLQKEVKINEVVLKYVNRLSDYLFAIARVINARLQVKDVEYNR----------
General information:
TITO was launched using:
RESULT:
Template:
3KE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67640 for 1367 contacts (-49.5/contact) +
2D Compatibility (PS) -19089 + (NN) -7390 + (LL) 760
1D Compatibility (HY) -16400 + (ID) 5200
Total energy: -114959.0 ( -84.10 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3KE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KE5-query.scw
PDB file :
Tito_Scwrl_3KE5.pdb
: