Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMPVILTNLTGKTATVTVKELLPGAFTSEDML
1UX0 Chain:B ((1-130))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEQTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL-
General information:
TITO was launched using:
RESULT:
Template:
1UX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78967 for 1040 contacts (-75.9/contact) +
2D Compatibility (PS) -14443 + (NN) -5946 + (LL) 176
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -117680.0 ( -113.15 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1UX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX0-query.scw
PDB file :
Tito_Scwrl_1UX0.pdb
: