Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKKFDEAAA-NNADNAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK----------------
1FJG Chain:T ((8-106))
--RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA
General information:
TITO was launched using:
RESULT:
Template:
1FJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12636 for 506 contacts (25.0/contact) +
2D Compatibility (PS) -9125 + (NN) -4580 + (LL) 68
1D Compatibility (HY) -400 + (ID) 1450
Total energy: -2851.0 ( -5.63 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1FJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJG-query.scw
PDB file :
Tito_Scwrl_1FJG.pdb
: