Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGHSILMIAQDVYYHDQANISFEDRLKVNYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV
3ASZ Chain:B ((4-196))
--PKPFVIGIAGGTASGKTTLAQALARTL-GERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEM-------------
General information:
TITO was launched using:
RESULT:
Template:
3ASZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83064 for 1520 contacts (-54.6/contact) +
2D Compatibility (PS) -20805 + (NN) -8258 + (LL) 1688
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -135689.0 ( -89.27 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3ASZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASZ-query.scw
PDB file :
Tito_Scwrl_3ASZ.pdb
: