Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIKAYPETVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELTKQKMSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN
1DEA Chain:A ((1-266))------MRLIPLTTAEQVGKWAAR-----HIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEY---VGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNG-NAPDIDAECRQYEEKIRSYGKI------HLFMGGVGN------------------DGHI---AFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLD---------------------------AEEVMILVLGSQKALALQAAVE-------------------GCVNHMWTISCLQLHPKAIMVC-DEPSTMELKVKTLRYFNELEAENIKGL-


General information:
TITO was launched using:
RESULT:

Template: 1DEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41343 for 2272 contacts (-18.2/contact) +
2D Compatibility (PS) -27917 + (NN) -3162 + (LL) 3704
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -76518.0 ( -33.68 by residue)
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_1DEA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DEA-query.scw
PDB file : Tito_Scwrl_1DEA.pdb: