Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGTHIITSQIEHHAVLKTCEYLETQGFEVTYLPVDEHGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRDQQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLAYQMHGGEQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIWRSAELDFEVNGLEADTLPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
4EB7 Chain:B ((3-373)) | -----YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESY-LNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC-GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -176693 for 3338 contacts (-52.9/contact) +
2D Compatibility (PS) -40676 + (NN) -18340 + (LL) 1380
1D Compatibility (HY) -29200 + (ID) 7100
Total energy: -270629.0 ( -81.08 by residue)
QMean score : 0.480
|
|
|