Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
3LWF Chain:A ((20-159))
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLSDLLKHSTDSELTDGYMFYI
General information:
TITO was launched using:
RESULT:
Template:
3LWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76076 for 915 contacts (-83.1/contact) +
2D Compatibility (PS) -15108 + (NN) -6010 + (LL) 0
1D Compatibility (HY) -18800 + (ID) 6950
Total energy: -122944.0 ( -134.37 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_3LWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWF-query.scw
PDB file :
Tito_Scwrl_3LWF.pdb
: