Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKGIVLREPSVVAMKK--DTQEIVAVGSDAKNMIGRTPGNIVAIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVGEPTGSMVVDIGGGTTEVAVISLGGIVTSRSVRTAGDDLDEVIINYIRKKYNLLIGDRTAEAIKMEIGSA-SPKGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRKKMN |
4CZM Chain:B ((3-332)) | -----SNDIAIDLGTANTLIYQKGKGIVLNEPSVVALRNVGGRKVVHAVGIEAKQMLGRTPGHMEAIRPMRDGVIADFEVAEEMIKYFIRKVHNRKGSGNPKVIVCVPSGATAVERRAINDSCLNAGARRVGLIDEPMAAAIGAGLPIHEPTGSMVVDIGGGTTEVAVLSLSGIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETTAERIKKEIGTARAPADGEGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEAVKVALEATPPELADDIADKGIMLTGGGALLRGLDAEIRDHTGLPVTVADDPLSCVALGCGKVLEHPKWMK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171199 for 2803 contacts (-61.1/contact) +
2D Compatibility (PS) -36188 + (NN) -14480 + (LL) 484
1D Compatibility (HY) -30000 + (ID) 9400
Total energy: -260783.0 ( -93.04 by residue)
QMean score : 0.590
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