Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYHSEPHERVLGLAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVA--NPSKFAIEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGDLVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEIDLTARNIIREAGFGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPGVAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE
3Q6D Chain:D ((4-356))MEK-IERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA-----GVVLISKKRAQFITDFRYVEQA-----SKQAVGYEIVQHAGLII-DEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAID-AEFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGNEVITKSPKELIIL-


General information:
TITO was launched using:
RESULT:

Template: 3Q6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -144926 for 3061 contacts (-47.3/contact) +
2D Compatibility (PS) -38236 + (NN) -15195 + (LL) 448
1D Compatibility (HY) -25600 + (ID) 7000
Total energy: -230509.0 ( -75.31 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_3Q6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q6D-query.scw
PDB file : Tito_Scwrl_3Q6D.pdb: