Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLESVEQFN-AIKSEGKSVFM--FSADWCGDCKFIEPVMPEIEAENEDFSFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKE-EINDFLAAI
4POL Chain:B ((6-109))
VKQIESKTAFQKALKAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKKKLEATINKLV---
General information:
TITO was launched using:
RESULT:
Template:
4POL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40250 for 665 contacts (-60.5/contact) +
2D Compatibility (PS) -10633 + (NN) -2770 + (LL) 492
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -65211.0 ( -98.06 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4POL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4POL-query.scw
PDB file :
Tito_Scwrl_4POL.pdb
: