Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTPFIISGIGLLGFIFFMTGVMTGAKWIQRFDHYWNSVIRVGITDTKTTVISYLTDIGGVATICILTAIIIIVFVFMRKVDTAIWFGSIVLIGGALIPSIIKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSR----------S---------WLRFTIGILALGIVIFVMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNEKLALWANKFKKA |
1QI9 Chain:A ((391-513)) | ---------------------------------------------------------------------------------------------------NPNNEVTYLLPQAIQE-GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQ-ELMTF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48021 for 643 contacts (-74.7/contact) +
2D Compatibility (PS) -10009 + (NN) 2185 + (LL) 10320
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -46975.0 ( -73.06 by residue)
QMean score : 0.167
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