Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKMKRLTWDETKITAFQEALVSWYEANKRVLPWRENTE--------PYRIWVSEIMLQQTKVDTVIPYFNRFMTQFPTMESFVNADEADILKAWEGLGYYSRVRNLQTAMKQVMADFSGEVPTDLTTILSL-KGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEIGEDIMKASTRKIFEEVLYQLIDKKNPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHKNGVETNYPVKIKKVKMKTKELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIEISKKENDEVAKLQFLHNYGLEVLLEDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNENWYFATEEEMKRLAFPVPYQKMWQAWKDFKGE |
3N5N Chain:Y ((11-237)) | ---------DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQR---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153425 for 1697 contacts (-90.4/contact) +
2D Compatibility (PS) -22202 + (NN) -5032 + (LL) 13064
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -190045.0 ( -111.99 by residue)
QMean score : 0.527
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