Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKSIGLDDQAAIELLIKRSRNHE
3BY6 Chain:B ((10-80))
--------RPVYLQLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFITGNTA-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22009 for 488 contacts (-45.1/contact) +
2D Compatibility (PS) -7511 + (NN) -1195 + (LL) 4360
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -32255.0 ( -66.10 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3BY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BY6-query.scw
PDB file :
Tito_Scwrl_3BY6.pdb
: