Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVTNELVYEGKAKRLFKTEEAGVLRVAYKDDATALNGVRKESFAGKGELNNQITSLIFSHLAEAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAKRLGKEEGEQIPNAIVEFYYKDDALDDPFINDDHVLYLEVATTSEMDTIRQAARSINKVLQELFNQMNITLIDFKLEFGRDAAGEILLADEISPDTCRLWDKETNQKLDKDVFRRNIGNLTDVYTEVLNRLKQVQN
4NYE Chain:B ((22-254))-SKQLIYSGKAKDIYTTEDENLIISTYKDQATAFNGVKKEQIAGKGVLNNQISSFIFEKLNVAGVATHFVEKLSDTEQLNKKVKIIPLEVVLRNYTAGSFSKRFGVDEGIALETPIVEFYYKNDDLDDPFINDEHVKFLQIAGDQQIAYLKEETRRINELLKVWFAEIGLKLIDFKLEFGFDKDGKIILADEFSPDNCRLWDADGNH-MDKDVFRRGLGELTDVYEIVWEKLQEL--


General information:
TITO was launched using:
RESULT:

Template: 4NYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86616 for 1826 contacts (-47.4/contact) +
2D Compatibility (PS) -24403 + (NN) -2344 + (LL) 296
1D Compatibility (HY) -29200 + (ID) 6250
Total energy: -148517.0 ( -81.33 by residue)
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_4NYE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NYE-query.scw
PDB file : Tito_Scwrl_4NYE.pdb: