Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETGFVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVC--------------------------------------EQPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQANLTEQHGIKTFATLRQATKTLMKEKEARNAHK |
| 3AGD Chain:A ((322-447)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------REGDRVFLHLQGVIRFGGAEAVLDALTDLRTGWDAAVYPRWQEAAADRAALSAATGGGAVHEAAAAAANDGPIRTVVLNLARVDRIDDVGRRLIAEGVRRLQADGVRVEVEDPERI---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53285 for 517 contacts (-103.1/contact) +
2D Compatibility (PS) -8319 + (NN) 209 + (LL) 17476
1D Compatibility (HY) -800 + (ID) 600
Total energy: -45319.0 ( -87.66 by residue)
QMean score : 0.521
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