Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA
4A48 Chain:B ((2-65))
-QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYH-GETTPQILTDAVERAGYH--
General information:
TITO was launched using:
RESULT:
Template:
4A48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38168 for 447 contacts (-85.4/contact) +
2D Compatibility (PS) -7012 + (NN) -997 + (LL) 608
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -51919.0 ( -116.15 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_4A48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A48-query.scw
PDB file :
Tito_Scwrl_4A48.pdb
: