Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEGQAVTFEVVEGNRGAQAANVEKA
1C9O Chain:B ((1-65))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVK-
General information:
TITO was launched using:
RESULT:
Template:
1C9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24373 for 446 contacts (-54.6/contact) +
2D Compatibility (PS) -6839 + (NN) -2235 + (LL) 144
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -43453.0 ( -97.43 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_1C9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C9O-query.scw
PDB file :
Tito_Scwrl_1C9O.pdb
: