Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMSGGGRCNVTNRRPAEEIIKHIPGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRMFPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLKDGQEISASAVIVAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDVSLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGAGTVKMRLDLFPNVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLEETAEYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKLMEGLFFCGEILDINGYTGGYNITCALVTGHTAGAYAAEVSNA
4CNJ Chain:D ((4-387))--FDTIIIGGGPAGMMATISSSFYGQKTLLLEKNKRLGKKLAGTGGGRCNVTNNGNLDDLMAGIPGNGRFLYSVFSQFDNHDIINFFTENGVKLKVEDHGRVFPVTDKSRTIIEALEKKIAELGGTVITNTEIVSVKKTD-ELFTVRSSD-QAWTCQKLIVTTGGKSYPSTGSTGFGHDIARHFKHTVTDLEAAESPLLTDFP---HKALQGISLDDVTLSY----GKHIITH--DLLFTHFGLSGPAALRLSSFV--------KGGETIYLDVLPQMS----QQDLADFLEEHREKSLKNCLKILLPERIADFFTQPF----PEKVKQLNLSEKEALIKQIKELPISVTGKMSLAKSFVTKGGVSLKEINPKTLESKLVPGLHFAGEVLDINAHTGGFNITSALCTGWVAGS--------


General information:
TITO was launched using:
RESULT:

Template: 4CNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -264144 for 3431 contacts (-77.0/contact) +
2D Compatibility (PS) -41967 + (NN) -15313 + (LL) 2972
1D Compatibility (HY) -32400 + (ID) 9300
Total energy: -360152.0 ( -104.97 by residue)
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4CNJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CNJ-query.scw
PDB file : Tito_Scwrl_4CNJ.pdb: