Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
3Q8T Chain:A ((172-265)) | ---------------------------------------------------------------------------------------------GSDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKK---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30510 for 366 contacts (83.4/contact) +
2D Compatibility (PS) -11991 + (NN) -17279 + (LL) 8960
1D Compatibility (HY) -400 + (ID) 750
Total energy: 9050.0 ( 24.73 by residue)
QMean score : 1.221
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