Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKVRYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDF--PFAIHYDVKNIEQFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEESVRELKNSR----VEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAEWGFKQADFGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG |
3AB1 Chain:B ((13-329)) | ---DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSD-GSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183594 for 2643 contacts (-69.5/contact) +
2D Compatibility (PS) -33224 + (NN) -9990 + (LL) 1284
1D Compatibility (HY) -26000 + (ID) 5800
Total energy: -257324.0 ( -97.36 by residue)
QMean score : 0.598
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