Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKAEIK---VVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVSLP-LPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGT--VRDEALLFRLGYFSDQEKARLKEKAV-GDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
2W48 Chain:B ((8-315)) | ------RLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENL-PQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWH--AFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLLK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149855 for 2442 contacts (-61.4/contact) +
2D Compatibility (PS) -33058 + (NN) -11681 + (LL) 1028
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -222716.0 ( -91.20 by residue)
QMean score : 0.505
|
|
|