Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRGPQAEKVTKL
3PF4 Chain:B ((1-65))
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANVTK-
General information:
TITO was launched using:
RESULT:
Template:
3PF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23967 for 434 contacts (-55.2/contact) +
2D Compatibility (PS) -6663 + (NN) 157 + (LL) 176
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -40997.0 ( -94.46 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_3PF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PF4-query.scw
PDB file :
Tito_Scwrl_3PF4.pdb
: