Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVAISGGGTGGHVYPALALIRELKKS--HPEAEFLYIGTEKGLE-AGIVKREGIPF-EAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGYV-CGPVVYAAAKLKIPTLIHEQNSVA-----G----LTNKFLSRYTDKVAICFEEVSDSF-----ASEKIVFTGNP-RASEVVGVDSEGALE-AYGLVSGKPTVLVFGGSRGA-RGVNEAVEAVLPEWNNR--DFQLLYVTGDVHYEKIKDSLAELNLGNHISVQPFIY--DMPKILNAVTLVVSRAGATTLAELTALGVPSILI-PSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAKLNSMKLSAKQMGRPDAAAKLVEAVLSIMK |
| 3OT5 Chain:A ((28-392)) | IKVMSIFGTRPE-AIKMAPLVLALEKEPET--FESTVVITA----LDQVLEIFDIKPDIDLDIMK--GQ----TL--AEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLG-DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTEL-VYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-GGVQEEAPGMGVPVLVLRDTTER--------PEGIEAGTLK-LIGT-NK--ENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHF- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169993 for 2852 contacts (-59.6/contact) +
2D Compatibility (PS) -35892 + (NN) -14104 + (LL) 1516
1D Compatibility (HY) -6400 + (ID) 2500
Total energy: -227373.0 ( -79.72 by residue)
QMean score : 0.480
|
|
|