Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
| 3WU4 Chain:A ((90-188)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKDGPAAGIAMCTALVSCLTGNPVR--ADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENK---------------RDLEEIPDNVIADLDIHPVKRIEEVLTLALQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33684 for 704 contacts (-47.8/contact) +
2D Compatibility (PS) -10909 + (NN) -8686 + (LL) 15652
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -44477.0 ( -63.18 by residue)
QMean score : 0.423
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